Age-related diseases of the nervous system are diverse and will continue to grow in importance as
the population ages. So far, the most impactful among them have eluded successful clinical intervention; therefore, their investigation constitutes a clear need in the field of neuroscience. Among these
diseases are Alzheimer's, Parkinson's and the polyglutamine family of disorders, caused by the presence, accumulation and aggregation of misfolded proteins. Ground-breaking work has dissected how
cells coordinate responses to delay or suppress misfolded protein toxicity, yet neurons ultimately succumb to these proteins and diseases progress. Among processes involved in maintaining neuronal
homeostasis in the face of misfolded proteins are refolding and degradation pathways. Key to these
processes is the small modifier protein, ubiquitin. Here, we seek to investigate an aspect of ubiquitin
that has eluded exploration in neurodegeneration: unanchored, or free, ubiquitin chains and their impact on misfolded protein toxicity.
Ubiquitin is best known for targeting substrates for proteasomal degradation by being chemically
tethered onto them. Ubiquitin exists in numerous types of configurations, including chains that can
adopt a wide array of topological complexities and length, and that coordinate downstream substrate
recognition and processing. Among the types of poly-ubiquitin chains are unanchored species that
are not attached onto other proteins. We recently published evidence on the presence, function, utilization and processing of these chains in vivo. Among the most intriguing findings was the observation that free ubiquitin chains can be conjugated onto substrates en bloc, without the need to be first
dismantled into monomers. This novel finding led us to wonder whether it may be beneficial for cells
under stress to use ready-made chains to maintain homeostasis. In pilot examinations we found that
free ubiquitin chains suppress toxicity from disease-causing proteins. Our pilot data lead us to hypothesize that unanchored poly-ubiquitin is beneficial to the cellular response to misfolded disease
proteins. We propose to test this hypothesis through three aims that utilize a combination of physiological and biochemical assays.