Direct sequencing of serum antibodies after infection - Project Summary
Monoclonal antibodies (mAbs) are a well-validated drug platform with exquisite specificity,
diversity and potency. They offer the lowest-risk class of drug for development through licensure
and offer great potential for addressing emerging and re-emerging infectious diseases. To be
prepared as threats, like Ebola (EBOV), Marburg (MARV), and Zika viruses, continue to emerge
or re-emerge, rapid discovery capabilities are a critical element. One of the best current
methods for discovery of potent human mAbs is isolation of peripheral B-cells from
survivors/sero-positive individuals for single cell sequencing or hybridoma generation. However,
peripheral B-cells are not always easy to obtain and only represent a small percentage of the
total B-cell population across all bodily tissues. We have developed an antibody discovery
technology in which only serum antibodies are required, i.e. mAb sequences against a given
antigen can be sequenced de novo from polyclonal antibody (pAb) pools without the need for
sequencing of genetic material. We propose to further refine this novel proteomic approach and
apply it towards discovery of new antibodies in serum obtained from EBOV survivors. Here IgGs
from survivor plasma will be purified by filovirus glycoprotein antigen specificity and sequenced
independently of B-cells. Given our preliminary data, these efforts may yield mAbs that are
cross-reactive to ZEBOV, SUDV, BDBV, and possibly MARV. Viable mAbs will ultimately be
developed to become pan-EBOV (ZEBOV, SUDV, BDBV) and/or pan-filovirus (EBOV, MARV)
therapeutic products. But perhaps the most significant contribution of this work will be to further
develop our rapid antibody discovery approach, which may impact drug discovery in nearly all
sectors of the mAb industry, including infectious disease.