Project Summary/Abstract
Naturalistic contexts provide the opportunity to study the brain and behavior in response to the ethological
problems an animal is evolutionarily designed to solve. We seek to expand the capabilities of our current
behavioral segmentation approaches to provide a more precise and comprehensive account of behavior. By
incorporating recent innovations in machine learning, segmentation approaches that can account for behavioral
dynamics at multiple timescales, and increased breadth in the sampling modalities used to classify behaviors,
we will create a toolkit that our team and others can make use of to quantify complex, spontaneous behaviors.
We will implement an analysis pipeline to capture and make use of patterns of mouse body position,
vocalizations, and arousal states. We also aim to capitalize on recent insights into the role of the gut-brain axis
in shaping behavior. After validating our acquisition and analytical approaches, we will monitor these outputs in
response to controlled, parametric environmental manipulations in two distinct, ethologically-relevant contexts:
intruder response to resident urine signals and limited access to water. The exploratory data collected in these
experiments will be vital to validating our algorithmic advances and for piloting future grant proposals.
The foundation of this work is a diverse team approach. Our team, comprised of experts in social behavior
ethology, microbiota research information theory, and data-driven computational modeling, will take an end-to
end approach in executing this proposal. By starting with experimental design informed by all parties, we will
ensure that the resulting pipeline possesses sufficient structure and richness for meaningful analysis. the team
will help guide long-term research avenues that are both ethologically appropriate and computationally rigorous.
Lastly, we recognize that open access will greatly accelerate the validation and adoption of these technologies,
a stated aim of this RFA. Dissemination and access to our deliverables will benefit substantially from ongoing
relationships with the Pittsburgh Supercomputing Center and OpenBehavior.
The partnered hardware and software advances of Aim 1a and 1b represent the overarching goal of this
proposal, an advanced and comprehensive behavior segmentation platform. Aim 2 will interrogate temporally-
dynamic urine protein signals and Aim 3 will study how progressively increasing thirst induced through water-
restriction affect neurobehavioral measures. These contexts will be used to benchmark the broad applicability of
Aim 1 – as well as to explore the potential to address targeted research questions within these frameworks.