Wednesday, June 18, 2025 6/18/2025

High Performance Text Mining for Translator

Award Number: OT2TR003422
ORGANIZATION: NATIONAL CENTER FOR ADVANCING TRANSLATIONAL SCIENCES
OPDIV: NIH
AWARD CLASS: DISCRETIONARY
AWARD ACTIVITY TYPE: OTHER
PERIOD OF PERFORMANCE START DATE: 01/23/2020
PERIOD OF PERFORMANCE END DATE: 02/28/2025

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High Performance Text Mining for Translator - We propose to build a knowledge provider that will seek out, integrate and provide AIready, BioLink-compatible models via high-performance text-mining of the biomedical literature. Problems with Translator’s current mining of the biomedical literature that we intend to solve include: (1) weaknesses in framework extensibility and benchmarking that make integrating and validating new text-mining approaches difficult; (2) problematic licensing of software, terminologies and other resources that do not adequately support FAIR (and TLC) best practices; (3) processing only PubMed titles and abstracts, not full text publications; (4) Translator’s use of older NLP technology with relatively poor performance; (5) lack of a mechanism for community feedback regarding errors and other problems; (6) lack of continuous updates to add knowledge from new publications; (7) output knowledge representation that is simplistic and vague, failing to reflect the richness of what is expressed in scientific documents.


Issue Date FY	Funding FY	Legal Entity Name	Legal Entity Address	Legal Entity City	Legal Entity State	Legal Entity Zip Code	Legal Entity COUNTY	Legal Entity COUNTRY	Assistance Listing	Award Code	Budget Year	Action Date	Action Type	Action Amount

Issue Date FY: 2025 ( Subtotal = $0 )
2025	2024	THE REGENTS OF THE UNIVERSITY OF COLORADO	13001 E 17TH PL STE F428	AURORA	CO	80045	ADAMS	USA	National Center for Advancing Translational Sciences	001	1	11/29/2024	SUPPLEMENT FOR EXPANSION	$0
2025	2020	THE REGENTS OF THE UNIVERSITY OF COLORADO	13001 E 17TH PL STE F428	AURORA	CO	80045	ADAMS	USA	National Center for Advancing Translational Sciences	000	1	11/29/2024	NEW	$0
														Subtotal = $0

Issue Date FY: 2024 ( Subtotal = $679,669 )
2024	2024	THE REGENTS OF THE UNIVERSITY OF COLORADO	13001 E 17TH PL STE F428	AURORA	CO	80045	ADAMS	USA	National Center for Advancing Translational Sciences	003	1	2/14/2024	SUPPLEMENT FOR EXPANSION	$0
2024	2024	REGENTS OF THE UNIVERSITY OF COLORADO, THE	13001 E 17TH PLACE F428	AURORA	CO	80045	ADAMS	USA	National Center for Advancing Translational Sciences	002	1	12/6/2023	SUPPLEMENT FOR EXPANSION	$679,669
2024	2023	REGENTS OF THE UNIVERSITY OF COLORADO, THE	13001 E 17TH PLACE F428	AURORA	CO	80045	ADAMS	USA	National Center for Advancing Translational Sciences	000	1	11/3/2023	SUPPLEMENT FOR EXPANSION	$0
2024	2020	REGENTS OF THE UNIVERSITY OF COLORADO, THE	13001 E 17TH PLACE F428	AURORA	CO	80045	ADAMS	USA	National Center for Advancing Translational Sciences	001	1	11/30/2023	NEW	$0
														Subtotal = $679,669

Issue Date FY: 2023 ( Subtotal = $679,669 )
2023	2023	REGENTS OF THE UNIVERSITY OF COLORADO, THE	13001 E 17TH PLACE F428	AURORA	CO	80045	ADAMS	USA	National Center for Advancing Translational Sciences	002	1	3/8/2023	SUPPLEMENT FOR EXPANSION	$0
2023	2023	REGENTS OF THE UNIVERSITY OF COLORADO, THE	13001 E 17TH PLACE F428	AURORA	CO	80045	ADAMS	USA	National Center for Advancing Translational Sciences	001	1	12/22/2022	SUPPLEMENT FOR EXPANSION	$679,669
2023	2023	REGENTS OF THE UNIVERSITY OF COLORADO, THE	13001 E 17TH PLACE F428	AURORA	CO	80045	ADAMS	USA	National Center for Advancing Translational Sciences	003	1	5/29/2023	SUPPLEMENT FOR EXPANSION	$0
2023	2020	REGENTS OF THE UNIVERSITY OF COLORADO, THE	13001 E 17TH PLACE F428	AURORA	CO	80045	ADAMS	USA	National Center for Advancing Translational Sciences	000	1	12/1/2022	NEW	$0
														Subtotal = $679,669

Issue Date FY: 2022 ( Subtotal = $466,081 )
2022	2022	REGENTS OF THE UNIVERSITY OF COLORADO, THE	13001 E 17TH PLACE F428	AURORA	CO	80045	ADAMS	USA	National Center for Advancing Translational Sciences	001	1	1/27/2022	SUPPLEMENT FOR EXPANSION	$466,081
2022	2020	REGENTS OF THE UNIVERSITY OF COLORADO, THE	13001 E 17TH PLACE F428	AURORA	CO	80045	ADAMS	USA	National Center for Advancing Translational Sciences	000	1	1/26/2022	NEW	$0
														Subtotal = $466,081

Issue Date FY: 2021 ( Subtotal = $471,239 )
2021	2021	REGENTS OF THE UNIVERSITY OF COLORADO, THE	13001 E 17TH PLACE F428	AURORA	CO	80045	ADAMS	USA	National Center for Advancing Translational Sciences	001	1	2/9/2021	SUPPLEMENT FOR EXPANSION	$471,239
2021	2020	REGENTS OF THE UNIVERSITY OF COLORADO, THE	13001 E 17TH PLACE F428	AURORA	CO	80045	ADAMS	USA	National Center for Advancing Translational Sciences	000	1	2/4/2021	NEW	$0
														Subtotal = $471,239

Grand Total All Awards = $2,296,658

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High Performance Text Mining for Translator

Award Number: OT2TR003422

ORGANIZATION: NATIONAL CENTER FOR ADVANCING TRANSLATIONAL SCIENCES

OPDIV: NIH

AWARD CLASS: DISCRETIONARY

AWARD ACTIVITY TYPE: OTHER

PERIOD OF PERFORMANCE START DATE: 01/23/2020

PERIOD OF PERFORMANCE END DATE: 02/28/2025

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